PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.PBW5F
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 451aa    MW: 49209.6 Da    PI: 6.7361
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.PBW5FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000313563802854
                  CC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  28 Pk.askapskKlsKaeiLekAveYIksL 54 
                  P+ +   p+ K + a++L +A+eYIk L
  Aradu.PBW5F 356 PSpL---PAFKTDTASVLSEAIEYIKFL 380
                  5533...77899**************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.2E-6357388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-6361397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MAEDQFQASG NWWENPAIRN NWQPHHQQQD ESDHMMKPTR VSMDSSGGAG GGSSSVVFHD  60
PQKLQPPDSA TAATSSTDPN LHFMALGLSS PPIDWNQQPS FLRGEKGGEN SFRSMLQEEG  120
GGGGGMGLSP QQVHQWRSPE TEFKNNRGFC LEQNQFSPQY SSGDSTVTSQ QGFHHQNMDH  180
SAVLYGSPSS ILQGLLGPDH HHHHHQQQAN HNFSYPTSNY GLSSSSSNDF VPSSSSSNWS  240
NNNNNNNNNN KVPQFLRGSP PKQLSNSSSS PITTTNTSLH FTNNAPFWNA AAAAASDPKD  300
VRSTTFFPNS LQPPFFTNPS FDVQSKNMSE MRDSGAVVKK SGSEPTPKRP RNETTPSPLP  360
AFKTDTASVL SEAIEYIKFL HEQVTVLSTP YMKSGAPIQI QQGSGKSKEG EGPKQDLRSR  420
GLCLVPVSST FPMTHETTVD FWTPTFGGGS R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936493.10.0PREDICTED: transcription factor bHLH123-like
RefseqXP_015936494.10.0PREDICTED: transcription factor bHLH123-like
TrEMBLA0A0L9UMF01e-156A0A0L9UMF0_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SHZ01e-156A0A0S3SHZ0_PHAAN; Uncharacterized protein
STRINGGLYMA13G36010.21e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-47bHLH family protein